Genes and Development

Home Help [Feedback] [For Subscribers] [Archive] [Search] [Contents]
 QUICK SEARCH:   [advanced]


     


GENES & DEVELOPMENT 7:106-113, 1993
ISSN 0890-9369
This Article
Right arrow Full Text (PDF)
Right arrow References
Right arrow Alert me when this article is cited
Right arrow Alert me if a correction is posted
Right arrow Citation Map
Services
Right arrow Email this article to a friend
Right arrow Similar articles in this journal
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Download to citation manager
Right arrow reprints & permissions
Citing Articles
Right arrow Citing Articles via HighWire
Right arrow Citing Articles via Google Scholar
Google Scholar
Right arrow Articles by Fraser, P
Right arrow Articles by Grosveld, F
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by Fraser, P
Right arrow Articles by Grosveld, F
Social Bookmarking
 Add to CiteULike   Add to Connotea   Add to Del.icio.us   Add to Digg   Add to Reddit   Add to Technorati  
What's this?

Research Papers

Each hypersensitive site of the human beta-globin locus control region confers a different developmental pattern of expression on the globin genes.

P Fraser, S Pruzina, M Antoniou, and F Grosveld

Laboratory of Gene Structure and Expression, National Institute for Medical Research, Mill Hill, London, UK.

Abstract

We have tested the effect of the individual DNase I hypersensitive site (HS) regions of the globin locus control region (LCR) on the developmental expression pattern of the human gamma and beta genes in transgenic mice. The results show that HS3 is the most active site during the embryonic period. It is also the only site capable of high level expression of the gamma genes during fetal hematopoiesis, in a population of cells that are capable of expressing both the gamma and beta genes. Region HS4 shows the highest activity during the adult stage and expresses the gamma genes only at low levels during the embryonic period. HS2 drives equivalent levels of gamma or beta transgene expression throughout development. HS1 has a similar pattern to HS2, although the activity of HS1 is very low. From these results we conclude that the HS regions have distinct developmental specificities and suggest that in the complete LCR they interact with each other to form a larger complex which, in turn, interacts with the globin genes.



Add to CiteULike CiteULike   Add to Connotea Connotea   Add to Del.icio.us Del.icio.us   Add to Digg Digg   Add to Reddit Reddit   Add to Technorati Technorati    What's this?


This article has been cited by other articles:


Home page
Genome ResHome page
J. Dostie, T. A. Richmond, R. A. Arnaout, R. R. Selzer, W. L. Lee, T. A. Honan, E. D. Rubio, A. Krumm, J. Lamb, C. Nusbaum, et al.
Chromosome Conformation Capture Carbon Copy (5C): A massively parallel solution for mapping interactions between genomic elements
Genome Res., October 1, 2006; 16(10): 1299 - 1309.
[Abstract] [Full Text] [PDF]


Home page
Mol. Cell. Biol.Home page
M. Yu, H. Han, P. Xiang, Q. Li, and G. Stamatoyannopoulos
Autonomous Silencing as Well as Competition Controls {gamma}-Globin Gene Expression during Development.
Mol. Cell. Biol., July 1, 2006; 26(13): 4775 - 4781.
[Abstract] [Full Text] [PDF]


Home page
Exp. Biol. Med.Home page
P. A. Navas, Q. Li, K. R. Peterson, and G. Stamatoyannopoulos
Investigations of a Human Embryonic Globin Gene Silencing Element Using YAC Transgenic Mice.
Experimental Biology and Medicine, March 1, 2006; 231(3): 328 - 334.
[Abstract] [Full Text] [PDF]


Home page
Proc. Natl. Acad. Sci. USAHome page
R. M. Johnson, T. Prychitko, D. Gumucio, D. E. Wildman, M. Uddin, and M. Goodman
Phylogenetic comparisons suggest that distance from the locus control region guides developmental expression of primate beta-type globin genes
PNAS, February 28, 2006; 103(9): 3186 - 3191.
[Abstract] [Full Text] [PDF]


Home page
Genome ResHome page
D. C. King, J. Taylor, L. Elnitski, F. Chiaromonte, W. Miller, and R. C. Hardison
Evaluation of regulatory potential and conservation scores for detecting cis-regulatory modules in aligned mammalian genome sequences
Genome Res., August 1, 2005; 15(8): 1051 - 1060.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
J. Wang, H. Liu, C. M. Lin, M. I. Aladjem, and E. M. Epner
Targeted Deletion of the Chicken {beta}-Globin Regulatory Elements Reveals a Cooperative Gene Silencing Activity
J. Biol. Chem., June 17, 2005; 280(24): 23340 - 23348.
[Abstract] [Full Text] [PDF]


Home page
Genes Dev.Home page
R. Drissen, R.-J. Palstra, N. Gillemans, E. Splinter, F. Grosveld, S. Philipsen, and W. de Laat
The active spatial organization of the {beta}-globin locus requires the transcription factor EKLF
Genes & Dev., October 15, 2004; 18(20): 2485 - 2490.
[Abstract] [Full Text] [PDF]


Home page
Genes Dev.Home page
G. P. Patrinos, M. de Krom, E. de Boer, A. Langeveld, A.M. A. Imam, J. Strouboulis, W. de Laat, and F. G. Grosveld
Multiple interactions between regulatory regions are required to stabilize an active chromatin hub
Genes & Dev., June 15, 2004; 18(12): 1495 - 1509.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
T. Tahara, J. Sun, K. Nakanishi, M. Yamamoto, H. Mori, T. Saito, H. Fujita, K. Igarashi, and S. Taketani
Heme Positively Regulates the Expression of {beta}-Globin at the Locus Control Region via the Transcriptional Factor Bach1 in Erythroid Cells
J. Biol. Chem., February 13, 2004; 279(7): 5480 - 5487.
[Abstract] [Full Text] [PDF]


Home page
Hum Mol GenetHome page
P. A. Navas, R. A. Swank, M. Yu, K. R. Peterson, and G. Stamatoyannopoulos
Mutation of a transcriptional motif of a distant regulatory element reduces the expression of embryonic and fetal globin genes
Hum. Mol. Genet., November 15, 2003; 12(22): 2941 - 2948.
[Abstract] [Full Text] [PDF]


Home page
Nucleic Acids ResHome page
D. A. Jackson, J. C. McDowell, and A. Dean
{beta}-Globin locus control region HS2 and HS3 interact structurally and functionally
Nucleic Acids Res., February 15, 2003; 31(4): 1180 - 1190.
[Abstract] [Full Text] [PDF]


Home page
Proc. Natl. Acad. Sci. USAHome page
X. Hu, M. Bulger, J. N. Roach, S. K. Eszterhas, E. Olivier, E. E. Bouhassira, M. T. Groudine, and S. Fiering
Promoters of the murine embryonic beta -like globin genes Ey and beta h1 do not compete for interaction with the beta -globin locus control region
PNAS, February 4, 2003; 100(3): 1111 - 1115.
[Abstract] [Full Text] [PDF]


Home page
Hum Mol GenetHome page
P. A. Navas, Q. Li, K. R. Peterson, R. A. Swank, A. Rohde, J. Roy, and G. Stamatoyannopoulos
Activation of the {beta}-like globin genes in transgenic mice is dependent on the presence of the {beta}-locus control region
Hum. Mol. Genet., April 15, 2002; 11(8): 893 - 903.
[Abstract] [Full Text] [PDF]


Home page
Nucleic Acids ResHome page
K. D. Johnson, J. E. Norton, and E. H. Bresnick
Requirements for utilization of CREB binding protein by hypersensitive site two of the {beta}-globin locus control region
Nucleic Acids Res., April 1, 2002; 30(7): 1522 - 1530.
[Abstract] [Full Text] [PDF]


Home page
BloodHome page
T. Yu, D. M. Thomas, W. Zhu, M. Goodman, and D. L. Gumucio
Regulation of fetal versus embryonic gamma globin genes: appropriate developmental stage expression patterns in the presence of HS2 of the locus control region
Blood, February 1, 2002; 99(3): 1082 - 1084.
[Abstract] [Full Text] [PDF]


Home page
BloodHome page
M. A. Bender, J. N. Roach, J. Halow, J. Close, R. Alami, E. E. Bouhassira, M. Groudine, and S. N. Fiering
Targeted deletion of 5'HS1 and 5'HS4 of the {beta}-globin locus control region reveals additive activity of the DNaseI hypersensitive sites
Blood, October 1, 2001; 98(7): 2022 - 2027.
[Abstract] [Full Text] [PDF]


Home page
BloodHome page
M. A. Bender, M. G. Mehaffey, A. Telling, B. Hug, T. J. Ley, M. Groudine, and S. Fiering
Independent formation of DnaseI hypersensitive sites in the murine beta -globin locus control region
Blood, June 1, 2000; 95(11): 3600 - 3604.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
L.-G. Guy, N. Delvoye, and L. Wall
Expression of a Human beta -Globin Transgene in Mice with the CACC Motif and Upstream Sequences Deleted from the Promoter Still Depends on Erythroid Kruppel-like Factor
J. Biol. Chem., February 4, 2000; 275(5): 3675 - 3680.
[Abstract] [Full Text] [PDF]


Home page
Mol. Cell. Biol.Home page
J. C. McDowell and A. Dean
Structural and Functional Cross-Talk between a Distant Enhancer and the varepsilon -Globin Gene Promoter Shows Interdependence of the Two Elements in Chromatin
Mol. Cell. Biol., November 1, 1999; 19(11): 7600 - 7609.
[Abstract] [Full Text] [PDF]


Home page
BloodHome page
R. M. Kaufman, C. T.N. Pham, and T. J. Ley
Transgenic Analysis of a 100-kb Human beta -Globin Cluster-Containing DNA Fragment Propagated as a Bacterial Artificial Chromosome
Blood, November 1, 1999; 94(9): 3178 - 3184.
[Abstract] [Full Text] [PDF]


Home page
Proc. Natl. Acad. Sci. USAHome page
C.-H. Lee, M. R. Murphy, J.-S. Lee, and J. H. Chung
Targeting a SWI/SNF-related chromatin remodeling complex to the beta -globin promoter in erythroid cells
PNAS, October 26, 1999; 96(22): 12311 - 12315.
[Abstract] [Full Text] [PDF]


Home page
J. Immunol.Home page
X.-P. Zhong and M. S. Krangel
Enhancer-Blocking Activity Within the DNase I Hypersensitive Site 2 to 6 Region Between the TCR {alpha} and Dad1 Genes
J. Immunol., July 1, 1999; 163(1): 295 - 300.
[Abstract] [Full Text] [PDF]


Home page
BloodHome page
W. Zhu, C. TomHon, M. Mason, T. Campbell, E. Shelden, N. Richards, M. Goodman, and D. L. Gumucio
Analysis of Linked Human {varepsilon} and {gamma} Transgenes: Effect of Locus Control Region Hypersensitive Sites 2 and 3 or a Distal YY1 Mutation on Stage-Specific Expression Patterns
Blood, May 15, 1999; 93(10): 3540 - 3549.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
T. G. Sargent, C. C. DuBois, A. M. Buller, and J. A. Lloyd
The Roles of 5'-HS2, 5'-HS3, and the gamma -Globin TATA, CACCC, and Stage Selector Elements in Suppression of beta -Globin Expression in Early Development
J. Biol. Chem., April 16, 1999; 274(16): 11229 - 11236.
[Abstract] [Full Text] [PDF]


Home page
Mol. Cell. Biol.Home page
J. Bungert, K. Tanimoto, S. Patel, Q. Liu, M. Fear, and J. D. Engel
Hypersensitive Site 2 Specifies a Unique Function within the Human beta -Globin Locus Control Region To Stimulate Globin Gene Transcription
Mol. Cell. Biol., April 1, 1999; 19(4): 3062 - 3072.
[Abstract] [Full Text] [PDF]


Home page
Proc. Natl. Acad. Sci. USAHome page
E. Sakai, A. Bottaro, L. Davidson, B. P. Sleckman, and F. W. Alt
Recombination and transcription of the endogenous Ig heavy chain locus is effected by the Ig heavy chain intronic enhancer core region in the absence of the matrix attachment regions
PNAS, February 16, 1999; 96(4): 1526 - 1531.
[Abstract] [Full Text] [PDF]


Home page
Mol. Cell. Biol.Home page
A. Reik, A. Telling, G. Zitnik, D. Cimbora, E. Epner, and M. Groudine
The Locus Control Region Is Necessary for Gene Expression in the Human beta -Globin Locus but Not the Maintenance of an Open Chromatin Structure in Erythroid Cells
Mol. Cell. Biol., October 1, 1998; 18(10): 5992 - 6000.
[Abstract] [Full Text]


Home page
BloodHome page
P. Pasceri, D. Pannell, X. Wu, and J. Ellis
Full Activity From Human beta -Globin Locus Control Region Transgenes Requires 5'HS1, Distal beta -Globin Promoter, and 3' beta -Globin Sequences
Blood, July 15, 1998; 92(2): 653 - 663.
[Abstract] [Full Text] [PDF]


Home page
Mol. Cell. Biol.Home page
P. A. Navas, K. R. Peterson, Q. Li, E. Skarpidi, A. Rohde, S. E. Shaw, C. H. Clegg, H. Asano, and G. Stamatoyannopoulos
Developmental Specificity of the Interaction between the Locus Control Region and Embryonic or Fetal Globin Genes in Transgenic Mice with an HS3 Core Deletion
Mol. Cell. Biol., July 1, 1998; 18(7): 4188 - 4196.
[Abstract] [Full Text]


Home page
J. Biol. Chem.Home page
K. Igarashi, H. Hoshino, A. Muto, N. Suwabe, S. Nishikawa, H. Nakauchi, and M. Yamamoto
Multivalent DNA Binding Complex Generated by Small Maf and Bach1 as a Possible Biochemical Basis for beta -Globin Locus Control Region Complex
J. Biol. Chem., May 8, 1998; 273(19): 11783 - 11790.
[Abstract] [Full Text] [PDF]


Home page
Proc. Natl. Acad. Sci. USAHome page
J.-S. Lee, C.-H. Lee, and J. H. Chung
Studying the recruitment of Sp1 to the beta -globin promoter with an in vivo method: Protein position identification with nuclease tail (PIN*POINT)
PNAS, February 3, 1998; 95(3): 969 - 974.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
M. G. Marini, K. Chan, L. Casula, Y. W. Kan, A. Cao, and P. Moi
hMAF, a Small Human Transcription Factor That Heterodimerizes Specifically with Nrf1 and Nrf2
J. Biol. Chem., June 27, 1997; 272(26): 16490 - 16497.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
C. TomHon, W. Zhu, D. Millinoff, K. Hayasaka, J. L. Slightom, M. Goodman, and D. L. Gumucio
Evolution of a Fetal Expression Pattern via cis Changes near the gamma  Globin Gene
J. Biol. Chem., May 30, 1997; 272(22): 14062 - 14066.
[Abstract] [Full Text] [PDF]


Home page
BloodHome page
D. A. Shelton, L. Stegman, R. Hardison, W. Miller, J. H. Bock, J. L. Slightom, M. Goodman, and D. L. Gumucio
Phylogenetic Footprinting of Hypersensitive Site 3 of the beta -Globin Locus Control Region
Blood, May 1, 1997; 89(9): 3457 - 3469.
[Abstract] [Full Text] [PDF]


Home page
BloodHome page
F.-Y. Chan, J. Robinson, A. Brownlie, R. A. Shivdasani, A. Donovan, C. Brugnara, J. Kim, B.-C. Lau, H. E. Witkowska, and L. I. Zon
Characterization of Adult alpha - and beta -Globin Genes in the Zebrafish
Blood, January 15, 1997; 89(2): 688 - 700.
[Abstract] [Full Text] [PDF]


Home page
BloodHome page
N.A. Roberts, J.A. Sloane-Stanley, J.A. Sharpe, S.J. Stanworth, and W.G. Wood
Globin Gene Switching in Transgenic Mice Carrying HS2-Globin Gene Constructs
Blood, January 15, 1997; 89(2): 713 - 723.
[Abstract] [Full Text] [PDF]


Home page
Proc. Natl. Acad. Sci. USAHome page
Q. Liu, J. Bungert, and J. D. Engel
Mutation of gene-proximal regulatory elements disrupts human varepsilon -, gamma -, and beta -globin expression in yeast artificial chromosome transgenic mice
PNAS, January 7, 1997; 94(1): 169 - 174.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
L. Elnitski, W. Miller, and R. Hardison
Conserved E Boxes Function as Part of the Enhancer in Hypersensitive Site 2of the beta -Globin Locus Control Region. ROLE OF BASIC HELIX-LOOP-HELIX PROTEINS
J. Biol. Chem., January 3, 1997; 272(1): 369 - 378.
[Abstract] [Full Text] [PDF]


Home page
Genes Dev.Home page
M Wijgerde, J Gribnau, T Trimborn, B Nuez, S Philipsen, F Grosveld, and P Fraser
The role of EKLF in human beta-globin gene competition.
Genes & Dev., November 15, 1996; 10(22): 2894 - 2902.
[Abstract] [PDF]


Home page
J. Biol. Chem.Home page
M. M. Mason, J. A. Grasso, O. Gavrilova, and M. Reitman
Identification of Functional Elements of the Chicken epsilon -Globin Promoter Involved in Stage-specific Interaction with the beta /epsilon Enhancer
J. Biol. Chem., October 11, 1996; 271(41): 25459 - 25467.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
C. K. Babichuk, B. L. Duggan, and R. C. Bleackley
In Vivo Regulation of Murine Granzyme B Gene Transcription in Activated Primary T Cells
J. Biol. Chem., July 12, 1996; 271(28): 16485 - 16493.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
T. Ikuta, T. Papayannopoulou, G. Stamatoyannopoulos, and Y. W. Kan
Globin Gene Switching. IN VIVO PROTEIN-DNA INTERACTIONS OF THE HUMAN beta -GLOBIN LOCUS IN ERYTHROID CELLS EXPRESSING THE FETAL OR THE ADULT GLOBIN GENE PROGRAM
J. Biol. Chem., June 14, 1996; 271(24): 14082 - 14091.
[Abstract] [Full Text] [PDF]


Home page
DevelopmentHome page
R Tewari, N Gillemans, A Harper, M Wijgerde, G Zafarana, D Drabek, F Grosveld, and S Philipsen
The human beta-globin locus control region confers an early embryonic erythroid-specific expression pattern to a basic promoter driving the bacterial lacZ gene
Development, January 12, 1996; 122(12): 3991 - 3999.
[Abstract] [PDF]


Home page
Genes Dev.Home page
J Bungert, U Dave, K C Lim, K H Lieuw, J A Shavit, Q Liu, and J D Engel
Synergistic regulation of human beta-globin gene switching by locus control region elements HS3 and HS4.
Genes & Dev., December 15, 1995; 9(24): 3083 - 3096.
[Abstract] [PDF]


Home page
ScienceHome page
M. I. Aladjem, M. Groudine, L. L. Brody, E. S. Dieken, R. E. K. Fournier, G. M. Wahl, and E. M. Epner
Participation of the Human beta-Globin Locus Control Region in Initiation of DNA Replication
Science, November 3, 1995; 270(5237): 815 - 819.
[Abstract] [PDF]


Home page
Genes Dev.Home page
S Fiering, E Epner, K Robinson, Y Zhuang, A Telling, M Hu, D I Martin, T Enver, T J Ley, and M Groudine
Targeted deletion of 5'HS2 of the murine beta-globin LCR reveals that it is not essential for proper regulation of the beta-globin locus.
Genes & Dev., September 15, 1995; 9(18): 2203 - 2213.
[Abstract] [PDF]


Home page
J. Biol. Chem.Home page
D. E. Sabatino, C. Wong, A. P. Cline, L. Pyle, L. J. Garrett, P. G. Gallagher, and D. M. Bodine
A Minimal Ankyrin Promoter Linked to a Human gamma -Globin Gene Demonstrates Erythroid Specific Copy Number Dependent Expression with Minimal Position or Enhancer Dependence in Transgenic Mice
J. Biol. Chem., September 8, 2000; 275(37): 28549 - 28554.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
L. Elnitski, J. Li, C. T. Noguchi, W. Miller, and R. Hardison
A Negative Cis-element Regulates the Level of Enhancement by Hypersensitive Site 2 of the beta -Globin Locus Control Region
J. Biol. Chem., February 23, 2001; 276(9): 6289 - 6298.
[Abstract] [Full Text] [PDF]




Home Help [Feedback] [For Subscribers] [Archive] [Search] [Contents]
Genome Res. Learn. Mem.
Protein Science RNA Genes Dev.