|
|
|
Research Papers
Laboratory of Cellular and Developmental Biology, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bethesda, Maryland 20892.
Abstract
Nucleosomes are positioned in the presence of the yeast repressor alpha 2 in minichromosomes containing the alpha 2 operator and on the promoters of a-cell-specific genes regulated by alpha 2. To investigate the possibility that alpha 2 directs nucleosome position through an interaction with a component of the core particle, we analyzed chromatin structures adjacent to the operator in alpha cells containing mutations in the amino-terminal region of histone H4. Deletion or point mutation of specific amino acids in histone H4 altered the location and/or stability of nucleosomes adjacent to the alpha 2 operator. These changes in chromatin structure were accompanied by partial derepression of a beta-galactosidase reporter construct under alpha 2 control, even though alpha 2 remained bound to its operator sequence. Our data suggest that complete repression by alpha 2 requires stable positioning of nucleosomes in promoter regions and this positioning involves the conserved amino-terminal region of histone H4.
This article has been cited by other articles:
![]() |
K. Rippe, A. Schrader, P. Riede, R. Strohner, E. Lehmann, and G. Langst DNA sequence- and conformation-directed positioning of nucleosomes by chromatin-remodeling complexes PNAS, October 2, 2007; 104(40): 15635 - 15640. [Abstract] [Full Text] [PDF] |
||||
![]() |
N. Morohashi, Y. Yamamoto, S. Kuwana, W. Morita, H. Shindo, A. P. Mitchell, and M. Shimizu Effect of Sequence-Directed Nucleosome Disruption on Cell-Type-Specific Repression by {alpha}2/Mcm1 in the Yeast Genome Eukaryot. Cell, November 1, 2006; 5(11): 1925 - 1933. [Abstract] [Full Text] [PDF] |
||||
![]() |
S. Ercan, J. C. Reese, J. L. Workman, and R. T. Simpson Yeast Recombination Enhancer Is Stimulated by Transcription Activation Mol. Cell. Biol., September 15, 2005; 25(18): 7976 - 7987. [Abstract] [Full Text] [PDF] |
||||
![]() |
T. A. Simms, E. C. Miller, N. P. Buisson, N. Jambunathan, and D. Donze The Saccharomyces cerevisiae TRT2 tRNAThr gene upstream of STE6 is a barrier to repression in MAT{alpha} cells and exerts a potential tRNA position effect in MATa cells Nucleic Acids Res., September 30, 2004; 32(17): 5206 - 5213. [Abstract] [Full Text] [PDF] |
||||
![]() |
N. Sabet, F. Tong, J. P. Madigan, S. Volo, M. M. Smith, and R. H. Morse Global and specific transcriptional repression by the histone H3 amino terminus in yeast PNAS, April 1, 2003; 100(7): 4084 - 4089. [Abstract] [Full Text] [PDF] |
||||
![]() |
V. K. Chang, M. J. Fitch, J. J. Donato, T. W. Christensen, A. M. Merchant, and B. K. Tye Mcm1 Binds Replication Origins J. Biol. Chem., February 14, 2003; 278(8): 6093 - 6100. [Abstract] [Full Text] [PDF] |
||||
![]() |
A. J. Courey and S. Jia Transcriptional repression: the long and the short of it Genes & Dev., November 1, 2001; 15(21): 2786 - 2796. [Full Text] [PDF] |
||||
![]() |
D. P. Fitzgerald and W. Bender Polycomb Group Repression Reduces DNA Accessibility Mol. Cell. Biol., October 1, 2001; 21(19): 6585 - 6597. [Abstract] [Full Text] [PDF] |
||||
![]() |
G. A. Stafford and R. H. Morse GCN5 Dependence of Chromatin Remodeling and Transcriptional Activation by the GAL4 and VP16 Activation Domains in Budding Yeast Mol. Cell. Biol., July 15, 2001; 21(14): 4568 - 4578. [Abstract] [Full Text] [PDF] |
||||
![]() |
F. D. Urnov and A. P. Wolffe A Necessary Good: Nuclear Hormone Receptors and Their Chromatin Templates Mol. Endocrinol., January 1, 2001; 15(1): 1 - 16. [Full Text] |
||||
![]() |
A. J. Kastaniotis, T. A. Mennella, C. Konrad, A. M. R. Torres, and R. S. Zitomer Roles of Transcription Factor Mot3 and Chromatin in Repression of the Hypoxic Gene ANB1 in Yeast Mol. Cell. Biol., October 1, 2000; 20(19): 7088 - 7098. [Abstract] [Full Text] |
||||
![]() |
M. Lee, S. Chatterjee, and K. Struhl Genetic Analysis of the Role of Pol II Holoenzyme Components in Repression by the Cyc8-Tup1 Corepressor in Yeast Genetics, August 1, 2000; 155(4): 1535 - 1542. [Abstract] [Full Text] |
||||
![]() |
S. Venditti, M. A. Vega-Palas, and E. Di Mauro Heterochromatin Organization of a Natural Yeast Telomere. RECRUITMENT OF Sir3p THROUGH INTERACTION WITH HISTONE H4 N TERMINUS IS REQUIRED FOR THE ESTABLISHMENT OF REPRESSIVE STRUCTURES J. Biol. Chem., January 22, 1999; 274(4): 1928 - 1933. [Abstract] [Full Text] [PDF] |
||||
![]() |
J. Deckert, A. M. R. Torres, S. M. Hwang, A. J. Kastaniotis, and R. S. Zitomer The Anatomy of a Hypoxic Operator in Saccharomyces cerevisiae Genetics, December 1, 1998; 150(4): 1429 - 1441. [Abstract] [Full Text] |
||||
![]() |
V. Mutskov, D. Gerber, D. Angelov, J. Ausio, J. Workman, and S. Dimitrov Persistent Interactions of Core Histone Tails with Nucleosomal DNA following Acetylation and Transcription Factor Binding Mol. Cell. Biol., November 1, 1998; 18(11): 6293 - 6304. [Abstract] [Full Text] |
||||
![]() |
K. Weiss and R. T. Simpson High-Resolution Structural Analysis of Chromatin at Specific Loci: Saccharomyces cerevisiae Silent Mating Type Locus HMLalpha Mol. Cell. Biol., September 1, 1998; 18(9): 5392 - 5403. [Abstract] [Full Text] |
||||
![]() |
H. Friesen, J. C. Tanny, and J. Segall SPE3, Which Encodes Spermidine Synthase, Is Required for Full Repression Through NREDIT in Saccharomyces cerevisiae Genetics, September 1, 1998; 150(1): 59 - 73. [Abstract] [Full Text] |
||||
![]() |
S. L. Pfaff and W. L. Taylor Xenopus TFIIIA Gene Transcription Is Dependent on cis-Element Positioning and Chromatin Structure Mol. Cell. Biol., July 1, 1998; 18(7): 3811 - 3818. [Abstract] [Full Text] |
||||
![]() |
T.-H. Cheng, Y.-C. Li, and M. R. Gartenberg Persistence of an alternate chromatin structure at silenced loci in the absence of silencers PNAS, May 12, 1998; 95(10): 5521 - 5526. [Abstract] [Full Text] [PDF] |
||||
![]() |
M. Xu, R. T. Simpson, and M. P. Kladde Gal4p-Mediated Chromatin Remodeling Depends on Binding Site Position in Nucleosomes but Does Not Require DNA Replication Mol. Cell. Biol., March 1, 1998; 18(3): 1201 - 1212. [Abstract] [Full Text] |
||||
![]() |
I. M. Gavin, S. I. Usachenko, and S. G. Bavykin Nucleosome Structural Transition during Chromatin Unfolding Is Caused by Conformational Changes in Nucleosomal DNA J. Biol. Chem., January 23, 1998; 273(4): 2429 - 2434. [Abstract] [Full Text] [PDF] |
||||
![]() |
E. Y. Shim, C. Woodcock, and K. S. Zaret Nucleosome positioning by the winged helix transcription factor HNF3 Genes & Dev., January 1, 1998; 12(1): 5 - 10. [Abstract] [Full Text] |
||||
![]() |
M. J. Pazin, P. Bhargava, E. P. Geiduschek, and J. T. Kadonaga Nucleosome Mobility and the Maintenance of Nucleosome Positioning Science, May 2, 1997; 276(5313): 809 - 812. [Abstract] [Full Text] |
||||
![]() |
M. Shimizu, W. Li, H. Shindo, and A. P. Mitchell Transcriptional repression at a distance through exclusion of activator binding in vivo PNAS, February 4, 1997; 94(3): 790 - 795. [Abstract] [Full Text] [PDF] |
||||
![]() |
X J Ma, Q Lu, and M Grunstein A search for proteins that interact genetically with histone H3 and H4 amino termini uncovers novel regulators of the Swe1 kinase in Saccharomyces cerevisiae. Genes & Dev., June 1, 1996; 10(11): 1327 - 1340. [Abstract] [PDF] |
||||
![]() |
D G Edmondson, M M Smith, and S Y Roth Repression domain of the yeast global repressor Tup1 interacts directly with histones H3 and H4. Genes & Dev., May 15, 1996; 10(10): 1247 - 1259. [Abstract] [PDF] |
||||
![]() |
R E Kingston, C A Bunker, and A N Imbalzano Repression and activation by multiprotein complexes that alter chromatin structure. Genes & Dev., April 15, 1996; 10(8): 905 - 920. [Abstract] [PDF] |
||||
![]() |
X Ling, T A Harkness, M C Schultz, G Fisher-Adams, and M Grunstein Yeast histone H3 and H4 amino termini are important for nucleosome assembly in vivo and in vitro: redundant and position-independent functions in assembly but not in gene regulation. Genes & Dev., March 15, 1996; 10(6): 686 - 699. [Abstract] [PDF] |
||||
![]() |
J Wong, Y B Shi, and A P Wolffe A role for nucleosome assembly in both silencing and activation of the Xenopus TR beta A gene by the thyroid hormone receptor. Genes & Dev., November 1, 1995; 9(21): 2696 - 2711. [Abstract] [PDF] |
||||
![]() |
P C Megee, B A Morgan, and M M Smith Histone H4 and the maintenance of genome integrity. Genes & Dev., July 15, 1995; 9(14): 1716 - 1727. [Abstract] [PDF] |
||||
![]() |
M C Marsolier, S Tanaka, M Livingstone-Zatchej, M Grunstein, F Thoma, and A Sentenac Reciprocal interferences between nucleosomal organization and transcriptional activity of the yeast SNR6 gene. Genes & Dev., February 15, 1995; 9(4): 410 - 422. [Abstract] [PDF] |
||||
![]() |
A John, S. Smith, and J. Jaynes Inserting the Ftz homeodomain into engrailed creates a dominant transcriptional repressor that specifically turns off Ftz target genes in vivo Development, January 6, 1995; 121(6): 1801 - 1813. [Abstract] [PDF] |
||||
![]() |
K Komachi, M J Redd, and A D Johnson The WD repeats of Tup1 interact with the homeo domain protein alpha 2. Genes & Dev., December 1, 1994; 8(23): 2857 - 2867. [Abstract] [PDF] |
||||
![]() |
J P Cooper, S Y Roth, and R T Simpson The global transcriptional regulators, SSN6 and TUP1, play distinct roles in the establishment of a repressive chromatin structure. Genes & Dev., June 15, 1994; 8(12): 1400 - 1410. [Abstract] [PDF] |
||||
![]() |
J R Bone, J Lavender, R Richman, M J Palmer, B M Turner, and M I Kuroda Acetylated histone H4 on the male X chromosome is associated with dosage compensation in Drosophila. Genes & Dev., January 1, 1994; 8(1): 96 - 104. [Abstract] [PDF] |
||||
![]() |
P A Covitz and A P Mitchell Repression by the yeast meiotic inhibitor RME1. Genes & Dev., August 1, 1993; 7(8): 1598 - 1608. [Abstract] [PDF] |
||||
![]() |
S. R. Biggar and G. R. Crabtree Chemically Regulated Transcription Factors Reveal the Persistence of Repressor-resistant Transcription after Disrupting Activator Function J. Biol. Chem., August 11, 2000; 275(33): 25381 - 25390. [Abstract] [Full Text] [PDF] |
||||